Detalhe da pesquisa
1.
Exact p-value calculation for XCorr scoring of high-resolution MS/MS data.
Proteomics
; 24(5): e2300145, 2024 Mar.
Artigo
Inglês
| MEDLINE | ID: mdl-37726251
2.
Efficient Indexing of Peptides for Database Search Using Tide.
J Proteome Res
; 22(2): 577-584, 2023 02 03.
Artigo
Inglês
| MEDLINE | ID: mdl-36633229
3.
The Crux Toolkit for Analysis of Bottom-Up Tandem Mass Spectrometry Proteomics Data.
J Proteome Res
; 22(2): 561-569, 2023 02 03.
Artigo
Inglês
| MEDLINE | ID: mdl-36598107
4.
Deep Convolutional Neural Networks Help Scoring Tandem Mass Spectrometry Data in Database-Searching Approaches.
J Proteome Res
; 20(10): 4708-4717, 2021 Oct 01.
Artigo
Inglês
| MEDLINE | ID: mdl-34449232
5.
Annotation of tandem mass spectrometry data using stochastic neural networks in shotgun proteomics.
Bioinformatics
; 36(12): 3781-3787, 2020 06 01.
Artigo
Inglês
| MEDLINE | ID: mdl-32207518
6.
Nuclear architecture dictates HIV-1 integration site selection.
Nature
; 521(7551): 227-31, 2015 May 14.
Artigo
Inglês
| MEDLINE | ID: mdl-25731161
7.
Tailor: A Nonparametric and Rapid Score Calibration Method for Database Search-Based Peptide Identification in Shotgun Proteomics.
J Proteome Res
; 19(4): 1481-1490, 2020 04 03.
Artigo
Inglês
| MEDLINE | ID: mdl-32175744
8.
Bias in False Discovery Rate Estimation in Mass-Spectrometry-Based Peptide Identification.
J Proteome Res
; 18(5): 2354-2358, 2019 05 03.
Artigo
Inglês
| MEDLINE | ID: mdl-30983355
9.
LZW-Kernel: fast kernel utilizing variable length code blocks from LZW compressors for protein sequence classification.
Bioinformatics
; 34(19): 3281-3288, 2018 10 01.
Artigo
Inglês
| MEDLINE | ID: mdl-29741583
10.
GaIn: Human Gait Inference for Lower Limbic Prostheses for Patients Suffering from Double Trans-Femoral Amputation.
Sensors (Basel)
; 18(12)2018 Nov 26.
Artigo
Inglês
| MEDLINE | ID: mdl-30486308
11.
Improved False Discovery Rate Estimation Procedure for Shotgun Proteomics.
J Proteome Res
; 14(8): 3148-61, 2015 Aug 07.
Artigo
Inglês
| MEDLINE | ID: mdl-26152888
12.
Tandem Mass Spectrum Identification via Cascaded Search.
J Proteome Res
; 14(8): 3027-38, 2015 Aug 07.
Artigo
Inglês
| MEDLINE | ID: mdl-26084232
13.
PTMTreeSearch: a novel two-stage tree-search algorithm with pruning rules for the identification of post-translational modification of proteins in MS/MS spectra.
Bioinformatics
; 30(2): 234-41, 2014 Jan 15.
Artigo
Inglês
| MEDLINE | ID: mdl-24215026
14.
Crux: rapid open source protein tandem mass spectrometry analysis.
J Proteome Res
; 13(10): 4488-91, 2014 Oct 03.
Artigo
Inglês
| MEDLINE | ID: mdl-25182276
15.
Chemical rule-based filtering of MS/MS spectra.
Bioinformatics
; 29(7): 925-32, 2013 Apr 01.
Artigo
Inglês
| MEDLINE | ID: mdl-23418188
16.
Toward an automatic method for extracting cancer- and other disease-related point mutations from the biomedical literature.
Bioinformatics
; 27(3): 408-15, 2011 Feb 01.
Artigo
Inglês
| MEDLINE | ID: mdl-21138947
17.
Correction to "Improved False Discovery Rate Estimation Procedure for Shotgun Proteomics".
J Proteome Res
; 15(12): 4779-4780, 2016 12 02.
Artigo
Inglês
| MEDLINE | ID: mdl-27767314
18.
Test-time augmentation for deep learning-based cell segmentation on microscopy images.
Sci Rep
; 10(1): 5068, 2020 03 19.
Artigo
Inglês
| MEDLINE | ID: mdl-32193485
19.
A Protein Classification Benchmark collection for machine learning.
Nucleic Acids Res
; 35(Database issue): D232-6, 2007 Jan.
Artigo
Inglês
| MEDLINE | ID: mdl-17142240
20.
Balanced ROC analysis (BAROC) protocol for the evaluation of protein similarities.
J Biochem Biophys Methods
; 70(6): 1210-4, 2008 Apr 24.
Artigo
Inglês
| MEDLINE | ID: mdl-17689617